Here is a selection of projects that I have been leading or involved with.
About InfraMIND-Dengue (Infrastructure for Modeling Infectious Diseases) is a project aimed at understanding dengue spread and studying interventions to reduce its burden through a framework of computational models. It integrates data from multiple sources, including epidemiological, entomological, and environmental data, which are used to calibrate a family of mechanistic and statistical models with different levels of complexity, allowing us to reproduce real world scenarios at multiple time spans (from weeks to years) and address specific questions with the appropriate level of detail.
Rationale We developed an analytical tool to forecast the relative abundance of mosquito species in urban areas. I was the lead developer and first author in the first version of this project.
A simple webpage to visualize respiratory diseases data from the NHSN
An educational tool for simulating an epidemic outbreak scenario for students to practice their skills as an outbreak response team.
We developed a multiscale agent-based model that combines within-host viral dynamics and between-hosts transmission dynamics. The viral dynamics model is fed with longitudinal viral load data of patients infected by the target pathogen, and it drives the infectiousness and disease progression in the transmission model.
